STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3390Probable porin signal peptide protein. (376 aa)    
Predicted Functional Partners:
RSp0279
Putative periplasmic component of the tol transport system tolb-related signal peptide protein.
  
 
 
 0.723
RSp1168
Probable transmembrane protein.
  
    0.665
RSc2108
Probable porin signal peptide protein.
  
  
 
0.662
RSp0051
Probable porin signal peptide protein.
  
  
 
0.659
RSc2933
Putative porin signal peptide protein.
  
  
 
0.656
RSc2136
Probable porin signal peptide protein.
  
  
 
0.652
RSp1399
Probable porin signal peptide protein.
  
  
 
0.651
RSc2855
Putative outer membrane porin signal peptide protein.
  
  
 
0.649
RSc3091
Probable outer membrane porin signal peptide protein.
  
  
 
0.649
RSp1594
Probable porin signal peptide protein.
  
  
 
0.649
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.