STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3392Probable response regulator transcription regulator protein. (224 aa)    
Predicted Functional Partners:
RSc1735
Probable two-component transmembrane sensor kinase transcription regulator protein.
 
 0.982
RSc2936
Putative transmembrane sensor kinase transcription regulator protein.
 
 0.982
RSc2935
Putative response regulator transcription regulator protein.
  
  
 
0.905
RSc1736
Probable two-component response regulator transcription regulator protein.
  
  
 
0.904
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.894
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.877
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.860
RSp0524
Probable transmembrane sensor histidine kinase transcription regulator protein.
 
 
 0.834
RSp1553
Probable transmembrane two-component sensor kinase transcription regulator protein.
 
 0.830
czcS
Sensor protein; Member of a two-component regulatory system.
 
 
 0.823
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.