STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3398Probable flavohemoprotein (hemoglobin-like) transmembrane; Belongs to the globin family. (401 aa)    
Predicted Functional Partners:
RSp0958
Probable hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
  
  
 0.967
RSc3399
Probable transmembrane protein.
  
  
 0.951
RSc1157
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
 0.930
sorAa
Probable sulfite:cytochrome c oxidoreductase (subunit a) oxidoreductase protein.
     
 0.834
RSc3397
Putative of unknown function upf0074; transcription regulator protein.
 
   
 0.830
RSp1220
Probable flavoprotein fad oxidoreductase.
 
  
 0.780
nirB
Probable nitrite reductase nadph (large subunit) oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.743
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
 
  
 0.740
RSc2090
Putative oxygen-binding protein (globin).
 
   
 0.664
RSc1546
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
  
 0.642
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.