STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3398Probable flavohemoprotein (hemoglobin-like) transmembrane; Belongs to the globin family. (401 aa)    
Predicted Functional Partners:
RSp0958
Probable hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
  
  
 0.971
RSc3399
Probable transmembrane protein.
  
  
 0.951
RSc1157
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
 0.934
RSc3397
Putative of unknown function upf0074; transcription regulator protein.
 
   
 0.834
sorAa
Probable sulfite:cytochrome c oxidoreductase (subunit a) oxidoreductase protein.
     
 0.789
aceA
Probable isocitrate lyase protein.
  
   
 0.768
RSp1220
Probable flavoprotein fad oxidoreductase.
 
  
 0.745
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
 
  
 0.709
nirB
Probable nitrite reductase nadph (large subunit) oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.701
RSc2090
Putative oxygen-binding protein (globin).
 
  
 0.646
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.