STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3403Probable two-component sensor kinase transcription regulator protein. (446 aa)    
Predicted Functional Partners:
RSc3404
Probable response regulator transcription regulator protein.
 
 0.962
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
   
 0.841
RSp1554
Probable two-component response regulator transcription regulator protein.
 
 0.839
RSc1736
Probable two-component response regulator transcription regulator protein.
 
 0.826
RSc0550
Probable response regulator transcription regulator protein.
 
 0.825
RSp0523
Putative two component response regulator transcription regulator protein.
 
 0.821
RSc3392
Probable response regulator transcription regulator protein.
 
 0.818
RSc2935
Putative response regulator transcription regulator protein.
 
 0.817
RSp1161
Probable two-component response regulator transcription regulator protein.
 
 0.793
RSp1196
Probable two component response regulator transcription regulator protein.
 
 0.790
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.