STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3410Probable amino acid-binding periplasmic (pbp) abc transporter protein. (255 aa)    
Predicted Functional Partners:
RSc3409
Probable amino-acid transmembrane abc transporter protein.
 
 0.994
RSc3408
Probable atp-binding abc transporter protein.
 
 0.993
RSp0933
Probable amino acid transmembrane abc transporter protein.
 
 0.978
RSc2259
Probable amino acid transmembrane abc transporter protein.
 
 0.976
RSp0480
Probable amino acid transmembrane abc transporter protein.
 
 0.968
RSc2258
Probable amino acid transmembrane abc transporter protein.
 
 0.957
RSc2105
Probable amino-acid transmembrane abc transporter protein.
 
 0.951
gltJ
Probable glutamate/aspartate transmembrane abc transporter protein.
 
 0.939
RSc2104
Probable amino-acid transmembrane abc transporter protein.
 
 0.910
RSp1576
Probable amino-acid transmembrane abc transporter protein.
   0.907
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.