STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3415Miscellaneous; hypothetical/partial homology. (74 aa)    
Predicted Functional Partners:
metX
Homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
  
  
 0.556
RSc3414
Hypothetical transmembrane protein.
       0.550
RSp0682
Putative histamine dehydrogenase oxidoreductase protein.
  
    0.491
RSc0922
Lipoprotein; Probable abc-type metal ion transport system, periplasmic component/surface antigen abc transporter protein; Belongs to the nlpA lipoprotein family.
  
    0.489
RSc3386
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
    0.489
gltD
Probable glutamate synthase (small subunit) oxidoreductase protein.
   
    0.472
RSc3416
Putative zn-finger domain associated with topoisomerase typeItransmembrane protein.
       0.458
RSp1276
Probable atp-dependent dna helicase II protein.
 
    0.423
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.