STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc3430Putative vgr-related protein. (921 aa)    
Predicted Functional Partners:
RSp0743
Hypothetical uncharacterised conserved protein ucp028301.
 
  
 0.902
RSp0745
Hypothetical protein of unknown function duf796.
 
  
 0.899
RSp0748
Hypothetical protein of unknown function duf1305.
 
  
 0.896
RSp0744
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
  
 0.862
RSp0739
Probable transmembrane protein.
  
 0.841
RSp0747
Hypothetical protein of unknown function duf879, bacterial.
 
  
 0.837
RSp0746
Hypothetical protein of unknown function duf1316.
 
  
 0.833
RSp0749
Putative clpa/b-type chaperone protein; Belongs to the ClpA/ClpB family.
 
  
 0.831
RSp0759
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
  
 0.831
RSp0740
Hypothetical protein of unknown function duf876, bacterial.
  
 0.828
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.