STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
repAProbable repa replicase protein. (341 aa)    
Predicted Functional Partners:
parB
Putative partitioning protein; Belongs to the ParB family.
  
   
 0.927
RSc3360
Hypothetical transmembrane protein.
  
     0.769
RSc2655
Probable transmembrane protein.
  
     0.765
addB
Probable homologous recombinational repair protein.
  
     0.764
RSc2734
Probable response regulator transcription regulator protein.
  
     0.755
RSp0611
Probable transmembrane protein.
  
     0.750
pehS
Probable transmembrane sensor histidine kinase transcription regulator protein.
  
     0.739
RSc2677
Putative type 4 fimbrial biogenesis pilw-related protein transmembrane.
  
     0.736
RSc3094
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.734
RSc2675
Putative type 4 fimbrial biogenesis pily1-related protein signal peptide.
  
     0.723
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.