STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parBPutative partitioning protein; Belongs to the ParB family. (334 aa)    
Predicted Functional Partners:
parA
Probable partition protein.
 
 0.987
repA
Probable repa replicase protein.
  
   
 0.927
RSc3094
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.665
parA2
Putative chromosome partitioning protein para.
 
 
 0.656
RSc3360
Hypothetical transmembrane protein.
  
     0.634
RSc2655
Probable transmembrane protein.
  
    0.632
gspJ
Probable general secretory pathway j transmembrane protein.
  
     0.625
RSp0902
Putative integrase/recombinase protein; Belongs to the 'phage' integrase family.
  
  
 0.617
parB2
Putative chromosome partitioning protein parb; Belongs to the ParB family.
  
     0.603
pagL
Probable lipid a deacylase signal peptide protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.
  
     0.595
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.