Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mntH1Putative manganese transport transmembrane protein. (547 aa)    
Predicted Functional Partners:
acpA
Putative acid phosphatase protein.
  
   
 0.689
hoxN
Probable high affinity nickel transporter transmembrane protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
   
 0.688
RSp0026
Hypothetical protein; Miscellaneous; unknown.
       0.651
adc
Probable acetoacetate decarboxylase (adc) (aad) protein; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
  
     0.476
RSp0028
Lrr-gala family type III effector protein (gala 3).
       0.468
RSc2430
Putative transcription regulator protein.
  
     0.443
RSc2431
Putative chloride channel transmembrane protein.
 
   
 0.442
RSp0114
Probable transmembrane protein.
  
     0.438
RSp1652
Putative metallophosphoesterase/phosphohydrolase protein.
  
     0.432
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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