STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0033Probable oxidoreductase protein. (257 aa)    
Predicted Functional Partners:
RSp0035
Probable enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  0.936
RSp0034
Putative transcription regulator protein.
     0.935
RSp0032
Putative nadh:flavin oxidoreductases oxidoreductase protein.
 
 0.918
RSp0036
Probable acyl-coa dehydrogenase oxidoreductase protein.
 
  0.895
RSp0037
Probable acetyl-coenzyme a synthetase (acetate--coa ligase) protein.
 
     0.856
RSp0038
Probable thioesterase protein.
 
     0.855
RSp0039
Putative endoribonuclease l-psp; protein.
 
     0.853
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.749
RSp1434
Putative acyl-coa synthetases(amp-forming) protein.
 
  
   0.716
RSc0156
Putative short-chain dehydrogenase/reductase sdr; oxidoreductase protein.
  
     0.691
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.