Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RSc1827 | RSp0032 | RSc1827 | RSp0032 | Probable thioesterase protein. | Putative nadh:flavin oxidoreductases oxidoreductase protein. | 0.775 |
RSc1827 | RSp0034 | RSc1827 | RSp0034 | Probable thioesterase protein. | Putative transcription regulator protein. | 0.767 |
RSc1827 | RSp0035 | RSc1827 | RSp0035 | Probable thioesterase protein. | Probable enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.777 |
RSc1827 | RSp0037 | RSc1827 | RSp0037 | Probable thioesterase protein. | Probable acetyl-coenzyme a synthetase (acetate--coa ligase) protein. | 0.775 |
RSc1827 | RSp0038 | RSc1827 | RSp0038 | Probable thioesterase protein. | Probable thioesterase protein. | 0.905 |
RSc1827 | RSp0039 | RSc1827 | RSp0039 | Probable thioesterase protein. | Putative endoribonuclease l-psp; protein. | 0.764 |
RSc1827 | RSp0641 | RSc1827 | RSp0641 | Probable thioesterase protein. | Probable non ribosomal peptide synthetase protein. | 0.889 |
RSc1827 | pobB | RSc1827 | RSc2242 | Probable thioesterase protein. | Probable 4-hydroxybenzoate 3-monooxygenase oxidoreductase protein. | 0.900 |
RSc1827 | ubiA | RSc1827 | RSc2686 | Probable thioesterase protein. | Probable 4-hydroxybenzoate octaprenyltransferase transmembrane protein; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate. | 0.903 |
RSc1827 | ubiC | RSc1827 | RSc2780 | Probable thioesterase protein. | Putative chorismate lyase protein; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family. | 0.905 |
RSp0032 | RSc1827 | RSp0032 | RSc1827 | Putative nadh:flavin oxidoreductases oxidoreductase protein. | Probable thioesterase protein. | 0.775 |
RSp0032 | RSp0034 | RSp0032 | RSp0034 | Putative nadh:flavin oxidoreductases oxidoreductase protein. | Putative transcription regulator protein. | 0.949 |
RSp0032 | RSp0035 | RSp0032 | RSp0035 | Putative nadh:flavin oxidoreductases oxidoreductase protein. | Probable enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.952 |
RSp0032 | RSp0037 | RSp0032 | RSp0037 | Putative nadh:flavin oxidoreductases oxidoreductase protein. | Probable acetyl-coenzyme a synthetase (acetate--coa ligase) protein. | 0.996 |
RSp0032 | RSp0038 | RSp0032 | RSp0038 | Putative nadh:flavin oxidoreductases oxidoreductase protein. | Probable thioesterase protein. | 0.925 |
RSp0032 | RSp0039 | RSp0032 | RSp0039 | Putative nadh:flavin oxidoreductases oxidoreductase protein. | Putative endoribonuclease l-psp; protein. | 0.915 |
RSp0032 | RSp0641 | RSp0032 | RSp0641 | Putative nadh:flavin oxidoreductases oxidoreductase protein. | Probable non ribosomal peptide synthetase protein. | 0.595 |
RSp0034 | RSc1827 | RSp0034 | RSc1827 | Putative transcription regulator protein. | Probable thioesterase protein. | 0.767 |
RSp0034 | RSp0032 | RSp0034 | RSp0032 | Putative transcription regulator protein. | Putative nadh:flavin oxidoreductases oxidoreductase protein. | 0.949 |
RSp0034 | RSp0035 | RSp0034 | RSp0035 | Putative transcription regulator protein. | Probable enoyl-coa hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.983 |
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