Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSp0062Putative dioxygenase (alpha subunit) oxidoreductase protein. (414 aa)    
Predicted Functional Partners:
RSp0063
Probable ferredoxin oxidoreductase protein.
 
 0.998
eftB
Putative electron transfer flavoprotein beta-subunit.
 
 
  0.994
RSp0059
Putative alpha-helical ferredoxin; oxidoreductase protein.
 
 
 0.993
stcD
Probable stachydrine utilization oxidoreductase protein.
 
 
 0.990
eftA
Putative electron transfer flavoprotein alpha-subunit (alpha-etf).
 
 
  0.976
RSp0057
Putative 4-vinyl reductase motif harboring protein.
 
    0.943
nagH
Putative salicylate-5-hydroxylase small oxygenase component oxidoreductase protein.
  
 
 0.902
soxD1
Probable sarcosine oxidase (delta subunit) oxidoreductase protein.
 
    0.827
soxD2
Probable sarcosine oxidase (delta subunit) oxidoreductase protein.
 
    0.821
soxA1
Probable sarcosine oxidase (alpha subunit) oxidoreductase protein; Belongs to the GcvT family.
 
  
 0.801
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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