STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0086Putative rhs-related protein. (764 aa)    
Predicted Functional Partners:
RSp0457
Probable rhs-related protein.
 
     0.941
RSp0459
Putative rhs-related protein.
 
    
0.930
RSp0455
Probable rhs-related protein.
 
     0.912
RSp0458
Probable rhs-related protein.
 
    
0.895
RSp0085
Putative rhs-related protein.
    
0.816
RSc2470
Probable rhs-related protein.
 
     0.790
RSp1585
Probable rhs-related transmembrane protein.
 
     0.786
RSp0087
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
    0.646
RSc0281
Putative beta-lactamase-like protein.
   
    0.422
RSc2654
Probable serine protease protein; Belongs to the peptidase S8 family.
 
    0.402
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.