STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0096Putative rhs-related protein. (705 aa)    
Predicted Functional Partners:
RSp0459
Putative rhs-related protein.
 
     0.976
RSp0457
Probable rhs-related protein.
 
     0.953
RSp0455
Probable rhs-related protein.
 
     0.918
RSp0458
Probable rhs-related protein.
 
    
0.901
RSc2470
Probable rhs-related protein.
 
     0.793
RSp1585
Probable rhs-related transmembrane protein.
 
     0.788
RSp0097
Probable ankyrin-repeat harboring protein.
  
  
 0.785
RSp0085
Putative rhs-related protein.
 
    
0.695
RSp0098
Hypothetical protein; Miscellaneous; unknown.
       0.536
ripA
Type III effector protein awr1.
       0.536
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.