STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0113Probable sulphate transporter; transmembrane protein. (520 aa)    
Predicted Functional Partners:
RSp0112
Putative carbonic anhydrase protein; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 0.973
RSc0277
Probable carbonic anhydrase protein.
  
 0.930
RSc1810
Probable polyketide synthase protein.
  
 
 0.737
nuoM
Probable transmembrane nadh dehydrogenaseI(chain m) oxidoreductase protein.
  
 
 0.697
petB
Putative cytochrome b subunit transmembrane protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.677
acpP
Probable acyl carrier protein 1 (acp 1); Carrier of the growing fatty acid chain in fatty acid biosynthesis.; Belongs to the acyl carrier protein (ACP) family.
    
   0.664
RSp1469
Probable tyrosine phosphatase protein.
   
   0.664
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.577
tek2
Probable tek-related protein.
    
   0.569
tek
Tek signal peptide protein.
    
   0.569
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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