STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0154Putative transmembrane protein. (62 aa)    
Predicted Functional Partners:
tISRso9-5
Isrso9-transposase protein.
     
 0.760
tISRso17-2
Isrso17-transposase protein.
     
 0.758
RSp0157
Miscellaneous; hypothetical/partial homology.
     
 0.702
RSp0153
Hypothetical protein; Miscellaneous; unknown.
       0.701
tISRso9
Irso9 transposase protein.
      
 0.624
tISRso1-6
Isrso1 transposase protein.
      
 0.624
RSp0125
Hypothetical prolin rich transmembrane protein.
      
 0.620
tISRso17
Isrso17-transposase protein.
      
 0.620
RSp0128
Putative helicase protein.
      
 0.619
tISRso1
Isrso1-transposase protein.
      
 0.537
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.