STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0163Probable phosphopantetheinyl transferase protein; Belongs to the P-Pant transferase superfamily. (272 aa)    
Predicted Functional Partners:
RSp0641
Probable non ribosomal peptide synthetase protein.
 
 0.990
RSc1806
Probable polyketide synthase protein.
 
 0.986
RSc1810
Probable polyketide synthase protein.
 
 0.970
RSp1422
Putative peptide synthetase protein.
 
 
 0.936
coaE
Probable dephospho-coa kinase (dephosphocoenzyme a kinase) protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
     
 0.911
acpS
Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
     
 0.904
RSc1811
Putative siderophore synthetase protein.
 
 
 0.897
RSp0642
Probable non ribosomal peptide synthetase protein.
 
 
 0.836
fabI
Probable enoyl-[acyl-carrier-protein] reductase [nadh] oxidoreductase.
  
  
 0.752
fabD
Probable malonyl coa-[acyl-carrier-protein] transacylase.
  
  
 0.744
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.