STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0165Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (65 aa)    
Predicted Functional Partners:
RSp1422
Putative peptide synthetase protein.
 
 
 0.999
RSc1811
Putative siderophore synthetase protein.
 
 
 0.998
RSp0641
Probable non ribosomal peptide synthetase protein.
 
 
 0.998
RSp0642
Probable non ribosomal peptide synthetase protein.
 
 
 0.998
RSc1806
Probable polyketide synthase protein.
 
 
 0.992
RSp1419
Putative peptide synthase protein.
 
 
 0.980
RSp0640
Probable decoration of polyketide or non ribosomal peptide protein.
  
  
 
0.908
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
 
  
 0.905
RSc1810
Probable polyketide synthase protein.
 
 
 0.870
RSp1425
Probable oxidoreductase oxidoreductase protein.
 
  
 0.866
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.