STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0182Probable transporter transmembrane protein. (453 aa)    
Predicted Functional Partners:
RSp0183
Probable 3-carboxymuconate cyclase protein.
       0.768
RSc2111
Probable dihydrodipicolinate synthase (dhdps) protein; Belongs to the DapA family.
  
  
 0.544
RSp0184
Hypothetical protein; Miscellaneous; unknown.
       0.486
RSp0180
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.438
RSp0181
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
    0.430
RSp0234
Probable metabolite transport transmembrane protein.
  
     0.414
RSp0185
Putative transcription regulator protein.
     
 0.401
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.