STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0185Putative transcription regulator protein. (298 aa)    
Predicted Functional Partners:
RSp0186
Probable bacterial extracellular solute-binding, family 3; abc transporter protein.
 
   
 0.889
RSp0835
Putative bifunctional nmn adenylyltransferase/nudix hydrolase : nicotinamide-nucleotide adenylyltransferase and adp compounds hydrolase protein; Belongs to the Nudix hydrolase family.
  
  
 0.772
RSc3062
Probable transcription regulator protein.
  
  
 0.616
RSp0184
Hypothetical protein; Miscellaneous; unknown.
       0.570
RSp0183
Probable 3-carboxymuconate cyclase protein.
 
   
 0.565
RSc0794
Probable transmembrane protein.
 
     0.550
scrA
Probable pts system, sucrose-specific (IIbc component) transmembrane protein.
  
  
 0.524
RSp0187
Hypothetical protein; Miscellaneous; unknown.
       0.519
RSp1282
Probable pts system, fructose-specific eIIa/hpr/ei components protein.
     
 0.510
RSp0331
Putative transcription regulator protein.
 
  
0.489
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.