STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0189Probable type iv pilus assembly fimv-related transmembrane protein. (673 aa)    
Predicted Functional Partners:
pilO
Probable fimbrial type-4 assembly membrane transmembrane protein.
  
  
 0.829
pilN
Probable fimbrial type-4 assembly membrane transmembrane protein.
  
  
 0.828
pilM
Probable fimbrial type-4 assembly protein.
  
  
 0.804
pilP
Probable fimbrial type-4 assembly lipoprotein.
  
    0.788
pilQ
Probable fimbrial type-4 assembly signal peptide protein.
  
  
 0.786
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.784
RSc0069
Probable signal peptide protein.
  
   
 0.777
pilZ
Putative type 4 fimbrial biogenesis protein.
  
     0.773
RSc2778
Putative tonb-related transmembrane protein.
  
     0.758
RSc1259
Putative signal peptide protein.
  
     0.750
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.