STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0196Probable prolyl aminopeptidase protein; Belongs to the peptidase S33 family. (320 aa)    
Predicted Functional Partners:
proC
Probable oxidoreductase pyrroline-5-carboxylate reductase signal peptide protein; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
  0.901
RSc2814
Putative prolyl 4-hydroxylase alpha subunit homologue oxidoreductase protein.
     
  0.900
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.900
RSc3352
Putative ornithine cyclodeaminase protein.
     
  0.900
RSp0483
Probable ornithine cyclodeaminase protein.
     
  0.900
RSp0195
Hypothetical protein; Miscellaneous; unknown.
       0.741
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.692
acpP
Probable acyl carrier protein 1 (acp 1); Carrier of the growing fatty acid chain in fatty acid biosynthesis.; Belongs to the acyl carrier protein (ACP) family.
   
   0.557
RSp0197
Putative chorismate mutase protein; Catalyzes the Claisen rearrangement of chorismate to prephenate.
       0.526
RSp0194
Putative 3-oxoacyl-[acyl-carrier-protein].
  
  
 0.505
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.