STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ncnHPutative naphthocyclinone hydroxylase transmembrane protein. (393 aa)    
Predicted Functional Partners:
RSc0474
Putative 3-hydroxyacyl-coa dehydrogenase oxidoreductase protein.
  
 0.765
RSc1759
3-hydroxyacyl-CoA dehydrogenase; Probable trifunctonal: enoyl-coa hydratase and delta3-cis-delta2-trans-enoyl-coa isomerase and 3-hydroxyacyl-coa dehydrogenase oxidoreductase protein.
  
 0.765
RSp0641
Probable non ribosomal peptide synthetase protein.
 
 
 0.659
eftA
Putative electron transfer flavoprotein alpha-subunit (alpha-etf).
 
 
 0.626
RSc1806
Probable polyketide synthase protein.
  
 0.600
RSc2044
Putative acyl-coa dehydrogenase oxidoreductase protein.
  
     0.586
etfA
Probable electron transfer flavoprotein (alpha-subunit).
  
 
 0.576
etfB
Probable electron transfer flavoprotein (beta-subunit).
  
 
 0.554
etf
Probable electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.551
eftB
Putative electron transfer flavoprotein beta-subunit.
  
 
 0.548
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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