STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0220Probable two-component transmembrane sensor histidine kinase transcription regulator protein. (461 aa)    
Predicted Functional Partners:
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
    
 0.840
pilH
Putative twitching motility two-component response regulator transcription regulator protein.
  
   0.782
vsrB
Composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
   0.768
RSc2734
Probable response regulator transcription regulator protein.
 
   
 0.768
RSc1073
Probable two-component system response regulator transcription regulator protein.
  
   0.743
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
0.719
RSp0611
Probable transmembrane protein.
  
     0.712
RSc0543
Probable response regulator transcription regulator protein.
  
   0.697
RSc2935
Putative response regulator transcription regulator protein.
  
   0.688
RSc1736
Probable two-component response regulator transcription regulator protein.
  
   0.667
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.