STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0220Probable two-component transmembrane sensor histidine kinase transcription regulator protein. (461 aa)    
Predicted Functional Partners:
pilH
Putative twitching motility two-component response regulator transcription regulator protein.
  
   0.780
RSc2734
Probable response regulator transcription regulator protein.
 
   
 0.766
vsrB
Composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
  
 
   0.765
RSc1073
Probable two-component system response regulator transcription regulator protein.
  
   0.740
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
0.735
RSp0611
Probable transmembrane protein.
  
     0.712
RSc0543
Probable response regulator transcription regulator protein.
  
   0.694
RSc2935
Putative response regulator transcription regulator protein.
  
   0.685
RSp1196
Probable two component response regulator transcription regulator protein.
  
   0.664
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
    
 0.663
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.