STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fcaProbable ferulic acid hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family. (277 aa)    
Predicted Functional Partners:
fcs
Probable feruloyl-coa synthetase protein.
 
 0.966
vdh
Probable vanillin dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
 
 0.947
paaH1
Probable 3-hydroxybutyryl-coa dehydrogenase oxidoreductase protein.
 
 0.900
paaH2
Putative 3-hydroxybutyryl-coa dehydrogenase oxidoreductase protein.
 
 0.826
vanA
Probable vanillate o-demethylase oxygenase subunit oxidoreductase protein.
  
  
 0.810
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.741
RSc1806
Probable polyketide synthase protein.
  
 0.698
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.673
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.673
RSp1178
Probable composite two-component transcriptional regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.665
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.