STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0229Putative benzaldehyde dehydrogenase oxidoreductase protein. (492 aa)    
Predicted Functional Partners:
RSc1823
Hypothetical protein; Small molecule metabolism.
   
 0.911
acyP1
Putative acylphosphatase; protein.
    
 0.903
ubiX
Probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.903
acyP2
Putative cog1254, acylphosphatase protein.
    
 0.903
fmt
Probable methionyl-trna formyltransferase protein; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
    
 0.877
RSp0230
Putative 3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase oxidoreductase protein.
 
   0.700
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.586
RSc1806
Probable polyketide synthase protein.
  
 
 0.530
RSp0228
Putative phenol-degradative gene regulator transcription regulator protein.
 
   
 0.514
gltB
Probable glutamate synthase (large subunit) oxidoreductase protein.
  
  
 0.459
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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