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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0230Putative 3-alpha-hydroxysteroid dehydrogenase/carbonyl reductase oxidoreductase protein. (255 aa)    
Predicted Functional Partners:
RSp0229
Putative benzaldehyde dehydrogenase oxidoreductase protein.
 
   0.700
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.681
RSp0231
Probable cog4313, involved in meta-pathway of phenol degradation signal peptide protein.
 
     0.680
RSp1422
Putative peptide synthetase protein.
  
 
 0.623
RSp0697
Probable dehydrogenase/reductase oxidoreductase protein.
  
     0.575
RSc1769
Probable oxidoreductase dehydrogenase signal peptide protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.568
tsaC
Probable toluenesulfonate zinc-independent alcohol dehydrogenase oxidoreductase protein.
  
     0.546
pglA
Polygalacturonase precursor (pga) (pectinase). signal peptide protein; Contributes to the wilt disease production on tomato; Belongs to the glycosyl hydrolase 28 family.
  
     0.539
idnO
Probable gluconate 5-dehydrogenase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.527
RSp1029
Putative transmembrane acyl-coa desaturase (fatty acid desaturase) oxidoreductase protein.
  
 
 
 0.518
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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