STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0233Probable hydrolase transmembrane protein. (302 aa)    
Predicted Functional Partners:
RSp0234
Probable metabolite transport transmembrane protein.
 
     0.744
RSp1231
Putative dimethylmenaquinone methyltransferase; protein.
 
   
 0.657
RSp0944
Probable transferase protein.
 
   
 0.627
RSc1078
Probable transcriptional regulatory dna-binding transcription regulator protein.
     0.624
RSp0331
Putative transcription regulator protein.
 
   
 0.467
RSp0057
Putative 4-vinyl reductase motif harboring protein.
  
     0.461
RSp0826
Probable 5-dehydro-4-deoxyglucarate dehydratase (5-keto-4-deoxy-glucarate dehydratase) (kdgdh) protein; Belongs to the DapA family.
 
  
 0.414
treY
Probable maltooligosyl trehalose synthase transmembrane protein.
       0.409
malQ
Probable 4-alpha-glucanotransferase (amylomaltase) protein.
       0.409
RSp0237
Putative 1,4-alpha-glucan branching enzyme protein.
       0.409
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.