STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0234Probable metabolite transport transmembrane protein. (416 aa)    
Predicted Functional Partners:
RSp0233
Probable hydrolase transmembrane protein.
 
     0.744
gudP
Putative glucarate transporter (d-glucarate permease) transmembrane protein.
  
     0.605
malQ
Probable 4-alpha-glucanotransferase (amylomaltase) protein.
     
 0.506
RSp0238
Probable pula pullulanase related glycosidase protein; Belongs to the glycosyl hydrolase 13 family.
     
 0.506
RSp0237
Putative 1,4-alpha-glucan branching enzyme protein.
     
 0.494
treY
Probable maltooligosyl trehalose synthase transmembrane protein.
       0.484
kgtP2
Putative alpha-ketoglutarate permease transmembrane protein.
 
     0.465
RSp1572
Putative transport transmembrane protein.
  
     0.454
RSc2352
Probable permease transmembrane protein.
  
     0.453
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.429
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.