STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0257Putative siderophore-interacting protein. (277 aa)    
Predicted Functional Partners:
RSp1422
Putative peptide synthetase protein.
  
  
 0.941
RSp0258
Putative transcription regulator protein.
   
 0.918
RSp0292
Probable typeIsecretion system, atp-binding transmembrane abc transporter protein.
   
   0.755
RSp1182
Putative typeIsecretion system, atp-binding transmembrane abc transporter protein.
   
   0.755
RSp0641
Probable non ribosomal peptide synthetase protein.
  
  
 0.629
RSc1811
Putative siderophore synthetase protein.
  
  
 0.573
RSp0642
Probable non ribosomal peptide synthetase protein.
  
  
 0.571
RSc1806
Probable polyketide synthase protein.
  
  
 0.570
RSp0243
Probable hemin transport protein.
  
  
 0.549
pabB
Putative para-aminobenzoate synthetase componentIprotein.
  
  
 0.502
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.