STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0270Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (1376 aa)    
Predicted Functional Partners:
RSp0272
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
   
 0.956
RSp0269
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.954
RSp0271
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.954
RSc2386
Putative segregation and condensation protein a; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.721
RSp0641
Probable non ribosomal peptide synthetase protein.
 
  
 0.629
polA
Probable dna polymeraseIprotein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
 0.577
RSp0275
Putative glycosyl hydrolase family 18 with carbohydrate binding domain transmembrane protein.
    
 
 0.542
RSc1961
Putative aaa atpase; protein.
 
 
 0.477
RSc1806
Probable polyketide synthase protein.
 
 
 0.455
RSp0273
Glutamate carboxypeptidase; Putative acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase and related deacylases protein.
   
   0.444
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.