STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0271Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (416 aa)    
Predicted Functional Partners:
RSp0270
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
 
   0.979
RSp0272
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
 
   0.970
RSp0269
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.952
RSp0846
Probable awr type III effector family protein.
   
   0.597
RSp0847
Probable awr type III effector family protein.
   
   0.597
RSc0246
Putative calcium binding hemolysin protein.
   
   0.413
RSc0299
Putative prolin-rich signal peptide protein.
   
   0.413
RSc3101
Putative serine protease protein.
   
   0.413
RSp0116
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
   0.413
RSp0559
Putative transmembrane protein.
   
   0.413
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.