STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysK1Probable cysteine synthase a protein. (324 aa)    
Predicted Functional Partners:
cysE1
Probable serine acetyltransferase protein.
 
 0.989
cysE2
Probable o-acetylserine synthase (serine acetyltransferase) protein.
 
 0.978
metC
Putative cystathionine beta-lyase (cysteine lyase) protein.
 0.977
RSp0781
Probable cystathionine beta-lyases/cystathionine gamma-synthases protein.
  
 0.960
cysI2
Probable sulfite reductase oxidoreductase protein.
  
 
 0.944
cysI1
Probable sulfite reductase oxidoreductase protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.944
serC
Probable phosphoserine aminotransferase (psat) protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.
  
 
 0.916
cysS
Probable cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.916
RSc1840
Putative aminotransferase protein.
    
 0.916
aspC
Probable aspartate aminotransferase protein.
    
 0.907
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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