STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0279Putative periplasmic component of the tol transport system tolb-related signal peptide protein. (475 aa)    
Predicted Functional Partners:
RSp0803
Putative hemagglutinin-related signal peptide protein.
 
     0.774
RSc0982
Probable transmembrane protein.
  
     0.767
RSp0631
Putative sel1-like repeat; harboring protein.
 
     0.753
RSp0275
Putative glycosyl hydrolase family 18 with carbohydrate binding domain transmembrane protein.
  
   
 0.748
folB2
Putative dihydroneopterin aldolase protein.
  
    0.738
folB1
Probable dihydroneopterin aldolase protein.
  
    0.732
RSp0630
Putative phospholipase protein.
 
     0.685
RSc3390
Probable porin signal peptide protein.
  
 
 
 0.683
RSp0712
Hypothetical protein of unknown function duf1326.
  
     0.637
RSp1274
Probable transmembrane protein.
  
     0.635
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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