STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0285Probable transcription regulator protein. (299 aa)    
Predicted Functional Partners:
RSc0191
Probable transmembrane two component system sensor kinase transcription regulator protein.
 
 
 0.834
RSc2311
Putative two-component sensor histidine kinase transcription regulator protein.
 
 
 0.828
vsrA
Transmembrane sensor kinase vsra transcription regulator protein.
 
 
 0.817
RSc3078
Probable response regulator transcription regulator protein.
  
    0.771
rcsB
Probable capsular synthesis response regulator transcription regulator protein.
  
     0.764
RSc3388
Probable two-component response regulator transcription regulator protein.
  
     0.761
RSp0381
Probable transcription regulator protein.
  
     0.758
RSc3160
Probable two component sensor histidine kinase transcription regulator protein.
 
 
 0.757
RSc2312
Probable two-component response regulator transcription regulator protein.
  
     0.745
vsrD
Response regulator transcription regulator protein.
  
     0.742
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.