STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hmsHPutative hemin-binding outer membrane transmembrane protein. (816 aa)    
Predicted Functional Partners:
hmsR
Putative hemin storage transmembrane protein.
 
   
 0.960
hmsF
Putative hemin storage signal peptide protein.
 
     0.946
RSp0289
Probable transmembrane protein.
       0.773
RSc0982
Probable transmembrane protein.
  
     0.731
folB1
Probable dihydroneopterin aldolase protein.
  
     0.722
folB2
Putative dihydroneopterin aldolase protein.
  
     0.692
RSp0279
Putative periplasmic component of the tol transport system tolb-related signal peptide protein.
  
     0.625
RSp0134
Probable transmembrane protein.
  
     0.552
RSp0803
Putative hemagglutinin-related signal peptide protein.
  
     0.537
RSp0631
Putative sel1-like repeat; harboring protein.
  
     0.503
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.