STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0292Probable typeIsecretion system, atp-binding transmembrane abc transporter protein. (725 aa)    
Predicted Functional Partners:
RSp0291
Probable typeIsecretion system transmembrane protein.
 
 0.987
RSp0290
Probable typeIsecretion system, outer membrane chanel lipoprotein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
  
 0.918
RSp0294
Putative hemolysin-type calcium-binding protein.
 
  
 0.918
RSp1183
Probable typeIsecretion system transmembrane protein.
 
 0.902
RSp0295
Putative hemolysin-type protein.
 
  
 0.873
RSc0102
Putative calcium binding hemolysin protein.
 
  
 0.872
RSc0249
Putative calcium binding hemolysin protein.
 
  
 0.852
RSc0246
Putative calcium binding hemolysin protein.
 
  
 0.812
RSc0104
Putative hemolysin-type calcium-binding protein.
 
    0.770
RSp0257
Putative siderophore-interacting protein.
   
   0.742
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.