STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0295Putative hemolysin-type protein. (692 aa)    
Predicted Functional Partners:
RSp0292
Probable typeIsecretion system, atp-binding transmembrane abc transporter protein.
 
  
 0.867
RSp0291
Probable typeIsecretion system transmembrane protein.
 
  
 0.804
RSc0104
Putative hemolysin-type calcium-binding protein.
 
    0.789
RSc0249
Putative calcium binding hemolysin protein.
  
0.683
RSp1182
Putative typeIsecretion system, atp-binding transmembrane abc transporter protein.
 
  
 0.664
RSp1183
Probable typeIsecretion system transmembrane protein.
 
  
 0.610
RSc0246
Putative calcium binding hemolysin protein.
 
 
0.483
RSc1120
Hypothetical transmembrane protein.
  
  
 0.458
RSp0290
Probable typeIsecretion system, outer membrane chanel lipoprotein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
  
 0.456
RSp1035
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology; Belongs to the UPF0276 family.
   
    0.424
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.