STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0308Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (305 aa)    
Predicted Functional Partners:
RSc0160
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.744
RSc2600
Putative substrate-binding domain related to lysr regulator protein.
  
     0.744
RSp0912
Probable transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.737
RSc0214
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.734
RSc2497
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.728
RSp1450
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.717
RSp1571
Probable transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.713
RSc2761
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.711
RSp0535
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.706
RSc2665
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.705
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.