STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0309Putative transcription regulator protein. (178 aa)    
Predicted Functional Partners:
RSp0317
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
     0.669
RSc3094
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
   
 0.657
tISRso1-3
Transposase protein.
      
 0.616
tISRso1-5
Transposase protein.
      
 0.616
soxA1
Probable sarcosine oxidase (alpha subunit) oxidoreductase protein; Belongs to the GcvT family.
     
 0.593
tISRso18-2
Isrso18-transposase protein.
      
 0.540
RSp1574
Putative transcriptional regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
   
  
 0.540
RSp0308
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
    0.537
RSp1137
Putative rhs-related transmembrane protein.
      
 0.531
tISRso1
Isrso1-transposase protein.
      
 0.528
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.