STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0315Probable transmembrane sensor kinase transcription regulator protein. (360 aa)    
Predicted Functional Partners:
RSp0314
Probable two component response regulator transcription regulator protein.
 
 0.963
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
    
 0.840
RSp1161
Probable two-component response regulator transcription regulator protein.
 
 0.811
RSp0917
Probable two component response regulator transcription regulator protein.
 
 0.734
RSc3064
Probable response regulator transcription regulator protein.
 
 0.726
mexC
Probable multidrug efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.719
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
0.715
pilH
Putative twitching motility two-component response regulator transcription regulator protein.
 
 
 0.677
RSp1442
Probable two-component response regulator transcription regulator protein.
 
 0.667
RSp1196
Probable two component response regulator transcription regulator protein.
 
 0.636
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.