STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0317Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (147 aa)    
Predicted Functional Partners:
RSp0316
Probable dioxygenase oxidoreductase protein.
 
     0.781
RSp0318
Probable universal stress protein related nucleotide-binding protein.
    
 0.764
RSp0309
Putative transcription regulator protein.
 
     0.666
RSc0702
Putative nadh:flavin oxidoreductases oxidoreductase protein.
      0.567
RSc2045
Probable acyl-coa dehydrogenase oxidoreductase protein.
  
     0.567
tauD
Putative alpha-ketoglutarate-dependent taurine dioxygenase oxidoreductase protein.
  
     0.498
RSp0136
Probable nadh:flavin oxidoreductases oxidoreductase protein.
     0.486
RSp1274
Probable transmembrane protein.
  
     0.486
ncnH
Putative naphthocyclinone hydroxylase transmembrane protein.
  
     0.483
RSc2537
Probable transcription regulator transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
 
      0.460
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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