STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSp0324Probable dehydrogenase, small chain oxidoreductase protein. (152 aa)    
Predicted Functional Partners:
RSp0325
Probable dehydrogenase, large chain oxidoreductase protein.
 
 0.980
RSc1468
Putative oxidoreductase molybdopterin-binding subunit, oxidoreductase protein.
 
 0.973
RSc0627
Putative dehydrogenase large chain transmembrane protein.
 
 0.955
iorB2
Probable transmembrane isoquinoline 1-oxidoreductase (beta subunit) oxidoreductase protein.
 
 0.945
xdhB
Probable xanthine dehydrogenase (subunit b) oxidoreductase protein.
 
     0.943
RSc1467
Probable dehydrogenase, oxidoreductase protein.
 
 0.870
RSp0327
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
  
 0.825
RSc0628
Probable xanthine and co dehydrogenases maturation factor protein.
 
  
 0.802
RSc1463
Hypothetical protein of unknown function duf182.
 
  
 0.802
RSc2920
Putative hydroxamate-type ferrisiderophore receptor signal peptide protein.
   
    0.716
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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