STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0326Probable organic hydroperoxide resistance protein. (144 aa)    
Predicted Functional Partners:
RSp0327
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
      0.890
RSp1106
Putative transcription regulator protein.
  
 0.784
dps
Putative dna protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family.
  
  
 0.658
RSp0386
Putative transcription regulator protein.
  
 0.590
RSp0325
Probable dehydrogenase, large chain oxidoreductase protein.
       0.509
RSp0324
Probable dehydrogenase, small chain oxidoreductase protein.
       0.474
RSc0588
Probable signal transduction protein eal-ggdef domains.
   
    0.465
RSc0621
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
    0.465
RSp1155
Probable signal transduction protein eal-ggdef domains.
   
    0.465
RSc1154
Putative aldo/keto reductase; oxidoreductase protein.
  
    0.451
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.