STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0331Putative transcription regulator protein. (298 aa)    
Predicted Functional Partners:
acnA3
Probable aconitate hydratase 1 protein; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
 
  
 0.735
RSc0794
Probable transmembrane protein.
 
   
 0.612
RSc3062
Probable transcription regulator protein.
  
  
 0.569
RSp0186
Probable bacterial extracellular solute-binding, family 3; abc transporter protein.
 
     0.563
RSp0835
Putative bifunctional nmn adenylyltransferase/nudix hydrolase : nicotinamide-nucleotide adenylyltransferase and adp compounds hydrolase protein; Belongs to the Nudix hydrolase family.
   
  
 0.529
leuB2
Probable 3-isopropylmalate dehydrogenase oxidoreductase protein.
 
     0.521
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.511
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.510
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
  
  
 0.509
RSc2963
Hypothetical uncharacterized protein upf0065; Miscellaneous; hypothetical/global homology.
 
   
 0.506
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.