STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSp0334Probable signal transduction protein eal-ggdef domains. (894 aa)    
Predicted Functional Partners:
RSp0254
Probable signal transduction eal-ggdef domains transmembrane protein.
 
 
0.900
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
 
 0.874
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.844
RSp0012
Probable signal transduction ggdef domain transmembrane protein.
 
 
0.840
RSp0132
Putative signal transduction ggdef domain transmembrane protein.
 
 0.840
RSc0588
Probable signal transduction protein eal-ggdef domains.
 
 
 
0.821
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.816
RSc0375
Probable signal transduction ggdef domain transmembrane protein.
 
 
0.785
RSp1203
Probable signal transduction protein ggdef domain.
 
 
0.782
RSc3387
Probable two-component response regulator with eal domain transcription regulator protein.
 
 
0.777
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.