STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
flgNProbable flagella synthesis protein flgn. (153 aa)    
Predicted Functional Partners:
flgK
Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
  
 
 0.991
flgM
Probable negative regulator of flagellin synthesis (anti-sigma-28 factor) protein.
  
  
 0.974
fliS
Probable flagellar protein flis.
  
  
 0.965
flgL
Probable flagellar hook-associated protein 3.
  
 
 0.957
fliD
Probable flagellar hook-associated protein 2 (filament cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.935
flgA
Putative flagella basal body p-ring formation protein.
  
  
 0.928
flgB
Probable flagellar basal-body rod protein flgb; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.919
flgJ
Probable flagellar protein flgj.
  
  
 0.915
flgC
Probable flagellar basal-body rod protein flgc; Belongs to the flagella basal body rod proteins family.
  
  
 0.909
fliC
Flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.886
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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