STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutH2Probable histidine ammonia-lyase protein. (528 aa)    
Predicted Functional Partners:
hutU
Probable urocanate hydratase (urocanase) (imidazolonepropionatehydrolase) protein; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.994
hutI
Probable imidazolonepropionase (imidazolone-5-propionatehydrolase). transmembrane protein; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.948
RSp0367
Putative acyl-coenzyme a synthetases/amp-(fatty) acid ligases and c 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase.
 
   
 0.938
RSp0368
Hypothetical transmembrane protein.
 
     0.924
hutH1
Probable histidine ammonia-lyase (histidase) protein; Belongs to the PAL/histidase family.
  
  
 
0.921
hisD
Probable histidinol dehydrogenase (hdh). oxidoreductase protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.921
RSp0363
Probable signal peptide protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.915
RSp0360
Putative cog4706, 3-hydroxylacyl-(acyl carrier) dehydratase oxidoreductase protein.
 
     0.912
RSp0366
Putative glycosyl transferase, family 2; transmembrane protein.
 
     0.912
RSp0362
Probable cog4258, predicted exporter transmembrane protein.
 
     0.909
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (30%) [HD]