Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RSc2897 | flgK | RSc2897 | RSp0351 | Putative type III effector protein. | Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family. | 0.697 |
| RSc2897 | flgL | RSc2897 | RSp0352 | Putative type III effector protein. | Probable flagellar hook-associated protein 3. | 0.617 |
| RSc2897 | flhA | RSc2897 | RSp1393 | Putative type III effector protein. | Probable flagellar biosynthesis flha transmembrane protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.662 |
| RSc2897 | fliD | RSc2897 | RSp0383 | Putative type III effector protein. | Probable flagellar hook-associated protein 2 (filament cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.905 |
| RSc2897 | fliJ | RSc2897 | RSp0394 | Putative type III effector protein. | Probable flagellar protein. | 0.646 |
| RSc2897 | fliS | RSc2897 | RSp0384 | Putative type III effector protein. | Probable flagellar protein flis. | 0.784 |
| RSc2897 | fliT | RSc2897 | RSp0385 | Putative type III effector protein. | Probable flagellar protein flit. | 0.900 |
| cheW | flgK | RSp1407 | RSp0351 | Probable chemotaxis protein chew. | Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family. | 0.778 |
| cheW | flgL | RSp1407 | RSp0352 | Probable chemotaxis protein chew. | Probable flagellar hook-associated protein 3. | 0.658 |
| cheW | flhA | RSp1407 | RSp1393 | Probable chemotaxis protein chew. | Probable flagellar biosynthesis flha transmembrane protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.596 |
| cheW | fliC | RSp1407 | RSp0382 | Probable chemotaxis protein chew. | Flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.684 |
| cheW | fliD | RSp1407 | RSp0383 | Probable chemotaxis protein chew. | Probable flagellar hook-associated protein 2 (filament cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.778 |
| cheW | fliJ | RSp1407 | RSp0394 | Probable chemotaxis protein chew. | Probable flagellar protein. | 0.461 |
| cheW | fliS | RSp1407 | RSp0384 | Probable chemotaxis protein chew. | Probable flagellar protein flis. | 0.730 |
| cheW | fliT | RSp1407 | RSp0385 | Probable chemotaxis protein chew. | Probable flagellar protein flit. | 0.517 |
| epsF | fliT | RSp1014 | RSp0385 | epsIpolysaccharide export inner membrane epsf. transmembrane protein; Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May play a role in export of EPS I or its intermediates across the membranes (By similarity); To S.marcescens SfuB. | Probable flagellar protein flit. | 0.473 |
| flgK | RSc2897 | RSp0351 | RSc2897 | Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family. | Putative type III effector protein. | 0.697 |
| flgK | cheW | RSp0351 | RSp1407 | Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family. | Probable chemotaxis protein chew. | 0.778 |
| flgK | flgL | RSp0351 | RSp0352 | Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family. | Probable flagellar hook-associated protein 3. | 0.998 |
| flgK | flhA | RSp0351 | RSp1393 | Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family. | Probable flagellar biosynthesis flha transmembrane protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family. | 0.977 |
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