STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliTProbable flagellar protein flit. (118 aa)    
Predicted Functional Partners:
fliS
Probable flagellar protein flis.
  
  
 0.966
fliD
Probable flagellar hook-associated protein 2 (filament cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
 
 0.935
RSc2897
Putative type III effector protein.
     
 
0.900
flgK
Probable flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
   
  
 0.717
fliC
Flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.685
flgL
Probable flagellar hook-associated protein 3.
  
 
 0.630
cheW
Probable chemotaxis protein chew.
  
  
 0.589
fliJ
Probable flagellar protein.
   
 
 0.553
fliE
Probable flagellar hook-basal body complex protein flie.
  
  
 0.552
epsF
epsIpolysaccharide export inner membrane epsf. transmembrane protein; Probably involved in polymerization and/or export of exopolysaccharide EPS I which functions as a virulence factor. May play a role in export of EPS I or its intermediates across the membranes (By similarity); To S.marcescens SfuB.
      
 0.549
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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